Upadhyaya Lab
Biophysics of Cellular Movements
Publications

  1. "Contraction Force and Velocity of Vorticella: An Ultrafast Biological Spring" A. Upadhyaya, J. Wong, M. Daniels, P. Matsudaira, A. van Oudenaarden and L. Mahadevan, Biophys. J. (2007 to appear).

  2. "Neutrophil chemorepulsion in defined interleukin-8 gradients in vitro and in vivo. " Tharp WG, Yadav R, Irimia D, Upadhyaya A, Samadani A, Hurtado O, Liu SY, Munisamy S, Brainard DM, Mahon MJ, Nourshargh S, van Oudenaarden A, Toner MG, Poznansky MC., J Leukoc Biol. 79, 539 (2006).

  3. "Actin polymerization: forcing flat faces forward" A. Upadhyaya and A. van Oudenaarden, Curr. Biol. 14, R467 (2004).

  4. "Tension in Tubulovesicular Networks of Golgi and Endoplasmic Reticulum Membranes" A. Upadhyaya and M. Sheetz, Biophys. J. 86, 2923 (2004).

  5. "Elastic Instability in Growing Yeast Colonies" B. Nguyen, A. Upadhyaya, A. van Oudenaarden, and M. P. Brenner, Biophys. J. 86, 2740 (2004).

  6. "Biomimetic systems for studying actin-based motility" A. Upadhyaya and A. van Oudenaarden, Curr. Biol. 13, R734 (2003).

  7. ``Probing polymerization forces by using actin-propelled lipid vesicles" A.Upadhyaya, J. R. Chabot, A. Andreeva, A. Samadani and A. van Oudenaarden PNAS 100, 4521 (2003). Science: Editor's Choice

  8. "Improving the realism of the cellular Potts model in simulations of biological cells" N. B. Ouchi, J. A. Glazier, J. P. Rieu, A. Upadhyaya and Y. Sawada, Physica A, 329, 451 (2003).

  9. "A microfabricated array bioreactor for perfused 3D liver culture" M. J. Powers, K. Domansky, M. R. Kaazempur-Mofrad, A. Kalezi, A. Capitano, A. Upadhyaya, P. Kurzawski, K. E. Wack, D. B. Stolz, R. Kamm, and L. G. Griffith, Biotechnol. Bioeng. 78, 257 (2002).

  10. "Bursts and cavity formation in Hydra cell aggregates: Experiments and simulations" J. C. M. Mombach, R. M. C. de Almeida, G. L. Thomas, A. Upadhyaya, and J. A. Glazier, Physica A, 297, 495 (2001).

  11. "Anomalous diffusion and non-Gaussian velocity distribution of Hydra cells in cellular aggregates" A. Upadhyaya, J. P. Rieu, Y. Sawada, J. A. Glazier, Physica A, 293, 549 (2001). Elemental Discoveries

  12. "Diffusion and deformations of single Hydra cells in cellular aggregates" J. P. Rieu, A. Upadhyaya, Y. Sawada, N.B. Ouchi and J. A. Glazier, Biophys. J., 79, 1903 (2000).

  13. "First steps towards acomprehensive model of tissues" J. A. Glazier and A. Upadhyaya, Dynamical Networks in Physics and Biology, (D. Beysens and G. Forgacs eds.) (Springer (Berlin), 1998)